PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00005077.1.g00001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bHLH
Protein Properties Length: 143aa    MW: 15679.1 Da    PI: 10.6065
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00005077.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.54.2e-124894354
                                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                    ++h+e ErrRR riNs ++ Lr++lP++      K++Ka++L ++v+ +++L
  FANhyb_rscf00005077.1.g00001.1 48 KKHSESERRRRMRINSQYAALRKILPNL-----IKMDKASVLAETVRQVREL 94
                                    68*************************9.....6************988877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.7734594IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.75E-54898No hitNo description
PfamPF000101.7E-94894IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.45E-1349102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-1349102IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-1051100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MPMGSAPSYF SKQIGFPQRY GIGQVNSIYS KNFTKSLSTA EAKVFSAKKH SESERRRRMR  60
INSQYAALRK ILPNLIKMDK ASVLAETVRQ VRELKKVVTD IDAACRGSGS GSGSECVIPS  120
GVNKLSLEKC EGKQEGLVKA TFS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004289527.11e-87PREDICTED: transcription factor bHLH131-like
TrEMBLM5WLM71e-62M5WLM7_PRUPE; Uncharacterized protein
STRINGGLYMA02G04650.21e-32(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.14e-26bHLH family protein